Cloning and sequence analysis of partial genomic DNA coding for HtrA-type serine protease of Wolbachia from human lymphatic filarial parasite, Wuchereria bancrofti
Identifieur interne : 004F96 ( Main/Exploration ); précédent : 004F95; suivant : 004F97Cloning and sequence analysis of partial genomic DNA coding for HtrA-type serine protease of Wolbachia from human lymphatic filarial parasite, Wuchereria bancrofti
Auteurs : R. Dhamodharan ; Sl Hoti ; G. Sivapragasam ; Mk DasSource :
- Tropical Parasitology [ 2229-5070 ] ; 2011.
Abstract
Periplasmic serine proteases of HtrA type of
This study was aimed to sequence Wb-HtrA serine protease and analyze its phylogenetic position by comparing with other filarial and non-filarial nematode homologs.
Partial HtrA gene fragment was amplified from DNA isolated from periodic and sub-periodic
Partial orthologue of HtrA-type serine protease from
HtrA-type serine protease from
Url:
DOI: 10.4103/2229-5070.86935
PubMed: 23508470
PubMed Central: 3593480
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Cloning and sequence analysis of partial genomic DNA coding for HtrA-type serine protease of <italic>Wolbachia</italic> from human lymphatic filarial parasite, <italic>Wuchereria bancrofti</italic></title><author><name sortKey="Dhamodharan, R" sort="Dhamodharan, R" uniqKey="Dhamodharan R" first="R" last="Dhamodharan">R. Dhamodharan</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Hoti, Sl" sort="Hoti, Sl" uniqKey="Hoti S" first="Sl" last="Hoti">Sl Hoti</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Sivapragasam, G" sort="Sivapragasam, G" uniqKey="Sivapragasam G" first="G" last="Sivapragasam">G. Sivapragasam</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Das, Mk" sort="Das, Mk" uniqKey="Das M" first="Mk" last="Das">Mk Das</name><affiliation><nlm:aff id="aff2"><italic>National Institute of Malaria Research (ICMR), Ranchi, India</italic></nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">23508470</idno><idno type="pmc">3593480</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3593480</idno><idno type="RBID">PMC:3593480</idno><idno type="doi">10.4103/2229-5070.86935</idno><date when="2011">2011</date><idno type="wicri:Area/Pmc/Corpus">004659</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">004659</idno><idno type="wicri:Area/Pmc/Curation">004658</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">004658</idno><idno type="wicri:Area/Pmc/Checkpoint">003040</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">003040</idno><idno type="wicri:Area/Ncbi/Merge">005719</idno><idno type="wicri:Area/Ncbi/Curation">005719</idno><idno type="wicri:Area/Ncbi/Checkpoint">005719</idno><idno type="wicri:doubleKey">2229-5070:2011:Dhamodharan R:cloning:and:sequence</idno><idno type="wicri:Area/Main/Merge">005034</idno><idno type="wicri:Area/Main/Curation">004F96</idno><idno type="wicri:Area/Main/Exploration">004F96</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Cloning and sequence analysis of partial genomic DNA coding for HtrA-type serine protease of <italic>Wolbachia</italic> from human lymphatic filarial parasite, <italic>Wuchereria bancrofti</italic></title><author><name sortKey="Dhamodharan, R" sort="Dhamodharan, R" uniqKey="Dhamodharan R" first="R" last="Dhamodharan">R. Dhamodharan</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Hoti, Sl" sort="Hoti, Sl" uniqKey="Hoti S" first="Sl" last="Hoti">Sl Hoti</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Sivapragasam, G" sort="Sivapragasam, G" uniqKey="Sivapragasam G" first="G" last="Sivapragasam">G. Sivapragasam</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Das, Mk" sort="Das, Mk" uniqKey="Das M" first="Mk" last="Das">Mk Das</name><affiliation><nlm:aff id="aff2"><italic>National Institute of Malaria Research (ICMR), Ranchi, India</italic></nlm:aff></affiliation></author></analytic><series><title level="j">Tropical Parasitology</title><idno type="ISSN">2229-5070</idno><idno type="eISSN">2229-7758</idno><imprint><date when="2011">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><sec id="st1"><title>Background:</title><p>Periplasmic serine proteases of HtrA type of <italic>Wolbachia</italic> have been shown to play a role in the pathogenesis of filarial disease.</p></sec><sec id="st2"><title>Aims:</title><p>This study was aimed to sequence Wb-HtrA serine protease and analyze its phylogenetic position by comparing with other filarial and non-filarial nematode homologs.</p></sec><sec id="st3"><title>Materials and Methods:</title><p>Partial HtrA gene fragment was amplified from DNA isolated from periodic and sub-periodic <italic>Wuchereria bancrofti</italic> parasites collected from Pondicherry and Nicobar islands, respectively. The amplicons were sequenced, and sequence homology and phylogenetic relationship with other filarial and non-filarial nematodes were analyzed.</p></sec><sec id="st4"><title>Results:</title><p>Partial orthologue of HtrA-type serine protease from <italic>Wolbachia</italic> of <italic>W. bancrofti</italic> was amplified, cloned and sequenced. The deduced amino acid sequence exhibited 87%, 81% and 74% identity with the homologous <italic>Wolbachia</italic> proteases identified from <italic>Brugia malayi, Onchocerca volvulus</italic> and <italic>Drosophila melanogaster</italic>, respectively. The Wb-HtrA has arthologues in several proteobacteria with very high homology and hence is highly conserved not only among <italic>Wolbachia</italic> of filarial parasites but also across proteobacteria. The phylogenetic tree constructed using Neighbor-Joining method showed two main clusters: cluster-I containing bacteria that dwell in diverse habitats such as soil, fresh and marine waters and plants and cluster-II comprising <italic>Anaplasma</italic> sp. and <italic>Erlichia</italic>, and <italic>Wolbachia</italic> endosymbionts of insects and nematodes, in distinct groups.</p></sec><sec id="st5"><title>Conclusions:</title><p>HtrA-type serine protease from <italic>Wolbachia</italic> of <italic>W. bancrofti</italic> is highly conserved among filarial parasites. It will be of interest to know whether filarial <italic>Wolbachia</italic> HtrA type of serine protease might influence apoptosis and lymphatic epithelium, thereby playing a role in the filarial pathogenesis. 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sortKey="Rao, Ru" uniqKey="Rao R">RU Rao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Taylor, Mj" uniqKey="Taylor M">MJ Taylor</name></author><author><name sortKey="Makunde, Wh" uniqKey="Makunde W">WH Makunde</name></author><author><name sortKey="Mcgarry, Hf" uniqKey="Mcgarry H">HF McGarry</name></author><author><name sortKey="Turner, Jd" uniqKey="Turner J">JD Turner</name></author><author><name sortKey="Mand, S" uniqKey="Mand S">S Mand</name></author><author><name sortKey="Hoerauf, A" uniqKey="Hoerauf A">A Hoerauf</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bandi, C" uniqKey="Bandi C">C Bandi</name></author><author><name sortKey="Trees, Aj" uniqKey="Trees A">AJ Trees</name></author><author><name sortKey="Brattig, Nw" uniqKey="Brattig N">NW Brattig</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, Qa" uniqKey="Liu Q">QA Liu</name></author><author><name sortKey="Hengartner, Mo" uniqKey="Hengartner M">MO Hengartner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Koonin, Ev" uniqKey="Koonin E">EV Koonin</name></author><author><name sortKey="Aravind, L" uniqKey="Aravind L">L Aravind</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Brondsted, L" uniqKey="Brondsted L">L Brondsted</name></author><author><name sortKey="Andersen, Mt" uniqKey="Andersen M">MT Andersen</name></author><author><name sortKey="Parker, M" uniqKey="Parker M">M Parker</name></author><author><name sortKey="Jorgensen, K" uniqKey="Jorgensen K">K Jorgensen</name></author><author><name sortKey="Ingmer, H" uniqKey="Ingmer H">H Ingmer</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list></list><tree><noCountry><name sortKey="Das, Mk" sort="Das, Mk" uniqKey="Das M" first="Mk" last="Das">Mk Das</name><name sortKey="Dhamodharan, R" sort="Dhamodharan, R" uniqKey="Dhamodharan R" first="R" last="Dhamodharan">R. Dhamodharan</name><name sortKey="Hoti, Sl" sort="Hoti, Sl" uniqKey="Hoti S" first="Sl" last="Hoti">Sl Hoti</name><name sortKey="Sivapragasam, G" sort="Sivapragasam, G" uniqKey="Sivapragasam G" first="G" last="Sivapragasam">G. Sivapragasam</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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